PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_A01G1398
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 269aa    MW: 29307.9 Da    PI: 6.5852
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_A01G1398genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_125.13.8e-0889135551
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 
                  k  +r   NReA r++R++ ka+ + Le++v  L a N++L k+l+ 
  Gh_A01G1398  89 KSKKRPLGNREAVRKYREKVKARAASLEDEVVRLRALNQQLVKRLQG 135
                  77899999**********************************99974 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.7E-785152IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1705.1E-1286153No hitNo description
PfamPF077161.5E-1387142IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.21E-589135No hitNo description
CDDcd146863.36E-1191144No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071294Biological Processcellular response to zinc ion
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    Send to blast
MDDGELDFSN QEVFSGNNMG DIPSSCSMDS FFDELLNDSH ACTHTHTCNP PGPDNSHTHT  60
CFHFHTKIVP ASSEDKAAID DTAVSGENKS KKRPLGNREA VRKYREKVKA RAASLEDEVV  120
RLRALNQQLV KRLQGQAALE AEVARLKCLL VDIRGRIEGE IGPFPYQKPA TNVNMMNVPG  180
AYVMNPCNVQ CNDQMYCLHP GVEDKTGEAA ALNGQGFNGC DFDNIQCLAN QNSTGGIGSA  240
GSNGNYSGTK RRKGKSLGVF LLIFLHNLC
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012467573.10.0PREDICTED: uncharacterized protein LOC105785918 isoform X1
RefseqXP_012467574.10.0PREDICTED: uncharacterized protein LOC105785918 isoform X1
SwissprotQ8VY761e-114BZP19_ARATH; Basic leucine zipper 19
TrEMBLA0A0B0PUK50.0A0A0B0PUK5_G
STRINGVIT_03s0038g02420.t011e-138(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM20362879
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35040.11e-115bZIP family protein